artisynth.core.util

Class AmiraLandmarkReader

java.lang.Object

artisynth.core.util.AmiraLandmarkReader

public class AmiraLandmarkReader
extends java.lang.Object

A class to read an ascii landmark file exported from Amira

Nested Class Summary

Nested Classes

Modifier and Type	Class and Description
static class	AmiraLandmarkReader.AmiraLandmarkFileFilter

Constructor Summary

Constructors

Constructor and Description
AmiraLandmarkReader()

Method Summary

Modifier and Type	Method and Description
static Point3d[]	read(java.io.Reader reader, double scale) Creates an array of 3D points from the landmark data from a Reader
static Point3d[]	read(java.lang.String fileName) Creates an array of 3D points from the landmark data from a file
static Point3d[]	read(java.lang.String fileName, double scale) Creates an array of 3D points from the landmark data from a file
static Point3d[][]	readSets(java.io.Reader reader, double scale) Creates an 2D array of 3D points from the landmark data from a Reader
static Point3d[][]	readSets(java.lang.String fileName) Creates an 2D array of 3D points from the landmark data from a file
static Point3d[][]	readSets(java.lang.String fileName, double scale) Creates an 2D array of 3D points from the landmark data from a file

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

AmiraLandmarkReader

public AmiraLandmarkReader()

Method Detail

read

public static Point3d[] read(java.lang.String fileName)
                      throws java.io.IOException

Creates an array of 3D points from the landmark data from a file

Parameters:

fileName - path name of the .landmarksAscii file

Returns:

list of points read from file

Throws:

java.io.IOException - if this is a problem reading the file

readSets

public static Point3d[][] readSets(java.lang.String fileName)
                            throws java.io.IOException

Creates an 2D array of 3D points from the landmark data from a file

Parameters:

fileName - path name of the .landmarksAscii file

Returns:

list of points read from file

Throws:

java.io.IOException - if this is a problem reading the file

read

public static Point3d[] read(java.lang.String fileName,
                             double scale)
                      throws java.io.IOException

Creates an array of 3D points from the landmark data from a file

Parameters:

fileName - path name of the .landmarksAscii file

scale - factor by which node coordinate data should be scaled

Returns:

list of points read from file

Throws:

java.io.IOException - if this is a problem reading the file

readSets

public static Point3d[][] readSets(java.lang.String fileName,
                                   double scale)
                            throws java.io.IOException

Creates an 2D array of 3D points from the landmark data from a file

Parameters:

fileName - path name of the .landmarksAscii file

scale - factor by which node coordinate data should be scaled

Returns:

list of points read from file

Throws:

java.io.IOException - if this is a problem reading the file

read

public static Point3d[] read(java.io.Reader reader,
                             double scale)
                      throws java.io.IOException

Creates an array of 3D points from the landmark data from a Reader

Parameters:

reader - reader from which to read amira landmark data

scale - factor by which node coordinate data should be scaled

Returns:

list of points read from file

Throws:

java.io.IOException - if this is a problem reading the file

readSets

public static Point3d[][] readSets(java.io.Reader reader,
                                   double scale)
                            throws java.io.IOException

Creates an 2D array of 3D points from the landmark data from a Reader

Parameters:

reader - reader from which to read amira landmark data

scale - factor by which node coordinate data should be scaled

Returns:

list of points read from file

Throws:

java.io.IOException - if this is a problem reading the file